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Cluster: HRGMv2_2140_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2140_3 HRGMv2_2140_3_151 158149 164706 - CBM35 | GH39
CAZyme HRGMv2_2140_3 HRGMv2_2140_3_152 164733 166736 - GH31_4
TC HRGMv2_2140_3 HRGMv2_2140_3_153 166775 167623 - 3.A.1.1.44
TC HRGMv2_2140_3 HRGMv2_2140_3_154 167623 168522 - 3.A.1.1.7
TC HRGMv2_2140_3 HRGMv2_2140_3_155 168605 169879 - 3.A.1.1.44
TF HRGMv2_2140_3 HRGMv2_2140_3_156 170040 171575 - HTH_AraC
TC HRGMv2_2140_3 HRGMv2_2140_3_157 171609 173423 - 9.B.33.1.1
pfam HRGMv2_2140_3 HRGMv2_2140_3_158 173667 174737 - Peripla_BP_1 | Peripla_BP_4
TC HRGMv2_2140_3 HRGMv2_2140_3_159 174803 175828 - 3.A.1.2.13
TC HRGMv2_2140_3 HRGMv2_2140_3_160 175821 177329 - 3.A.1.2.1
pfam HRGMv2_2140_3 HRGMv2_2140_3_161 177365 178447 - URO-D
TF HRGMv2_2140_3 HRGMv2_2140_3_162 178440 179318 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2140_3 HRGMv2_2140_3_163 179588 185047 - GH2
Gene ID: HRGMv2_2140_3_151
Type: CAZyme
Location: 158149 - 164706 (-)
Gene ID: HRGMv2_2140_3_152
Type: CAZyme
Location: 164733 - 166736 (-)
Gene ID: HRGMv2_2140_3_153
Type: TC
Location: 166775 - 167623 (-)
Gene ID: HRGMv2_2140_3_154
Type: TC
Location: 167623 - 168522 (-)
Gene ID: HRGMv2_2140_3_155
Type: TC
Location: 168605 - 169879 (-)
Gene ID: HRGMv2_2140_3_156
Type: TF
Location: 170040 - 171575 (-)
Gene ID: HRGMv2_2140_3_157
Type: TC
Location: 171609 - 173423 (-)
Gene ID: HRGMv2_2140_3_158
Type: pfam
Location: 173667 - 174737 (-)
Gene ID: HRGMv2_2140_3_159
Type: TC
Location: 174803 - 175828 (-)
Gene ID: HRGMv2_2140_3_160
Type: TC
Location: 175821 - 177329 (-)
Gene ID: HRGMv2_2140_3_161
Type: pfam
Location: 177365 - 178447 (-)
Gene ID: HRGMv2_2140_3_162
Type: TF
Location: 178440 - 179318 (-)
Gene ID: HRGMv2_2140_3_163
Type: CAZyme
Location: 179588 - 185047 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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