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Cluster: HRGMv2_2140_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_2 HRGMv2_2140_2_183 219009 220391 + 2.A.38.4.1
TC HRGMv2_2140_2 HRGMv2_2140_2_184 220404 221054 + 2.A.38.4.4
pfam HRGMv2_2140_2 HRGMv2_2140_2_185 221064 221873 + SpoU_methylase | MRM3-like_sub_bind
CAZyme HRGMv2_2140_2 HRGMv2_2140_2_186 221889 223343 + GH77
pfam HRGMv2_2140_2 HRGMv2_2140_2_187 223745 224560 + Hydrolase_2 | SH3_3
pfam HRGMv2_2140_2 HRGMv2_2140_2_188 224725 225156 + NfeD
TC HRGMv2_2140_2 HRGMv2_2140_2_189 225159 226088 + 8.A.21.2.2
Gene ID: HRGMv2_2140_2_183
Type: TC
Location: 219009 - 220391 (+)
Gene ID: HRGMv2_2140_2_184
Type: TC
Location: 220404 - 221054 (+)
Gene ID: HRGMv2_2140_2_185
Type: pfam
Location: 221064 - 221873 (+)
Gene ID: HRGMv2_2140_2_186
Type: CAZyme
Location: 221889 - 223343 (+)
Gene ID: HRGMv2_2140_2_187
Type: pfam
Location: 223745 - 224560 (+)
Gene ID: HRGMv2_2140_2_188
Type: pfam
Location: 224725 - 225156 (+)
Gene ID: HRGMv2_2140_2_189
Type: TC
Location: 225159 - 226088 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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