Cluster: HRGMv2_2128_CGC47
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2128
- CGC Family ID: CGCFAM_00006
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_1176 | 1395204 | 1396553 | + | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_2128_3 | HRGMv2_2128_3_1177 | 1396788 | 1397297 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_1178 | 1397365 | 1399308 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2128_3 | HRGMv2_2128_3_1179 | 1399364 | 1400647 | + | DegT_DnrJ_EryC1 |
| TC | HRGMv2_2128_3 | HRGMv2_2128_3_1180 | 1400670 | 1401416 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_1181 | 1401416 | 1402180 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2128_3 | HRGMv2_2128_3_1182 | 1402183 | 1403340 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2128_3 | HRGMv2_2128_3_1183 | 1403337 | 1403834 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_2128_3 | HRGMv2_2128_3_1184 | 1403847 | 1405154 | + | GT4 |
Gene ID: HRGMv2_2128_3_1176
Type: TC
Location: 1395204 - 1396553 (+)
Type: TC
Location: 1395204 - 1396553 (+)
Gene ID: HRGMv2_2128_3_1177
Type:
Location: 1396788 - 1397297 (+)
Type:
Location: 1396788 - 1397297 (+)
Gene ID: HRGMv2_2128_3_1178
Type: TC
Location: 1397365 - 1399308 (+)
Type: TC
Location: 1397365 - 1399308 (+)
Gene ID: HRGMv2_2128_3_1179
Type: pfam
Location: 1399364 - 1400647 (+)
Type: pfam
Location: 1399364 - 1400647 (+)
Gene ID: HRGMv2_2128_3_1180
Type: TC
Location: 1400670 - 1401416 (+)
Type: TC
Location: 1400670 - 1401416 (+)
Gene ID: HRGMv2_2128_3_1181
Type: CAZyme
Location: 1401416 - 1402180 (+)
Type: CAZyme
Location: 1401416 - 1402180 (+)
Gene ID: HRGMv2_2128_3_1182
Type:
Location: 1402183 - 1403340 (+)
Type:
Location: 1402183 - 1403340 (+)
Gene ID: HRGMv2_2128_3_1183
Type: pfam
Location: 1403337 - 1403834 (+)
Type: pfam
Location: 1403337 - 1403834 (+)
Gene ID: HRGMv2_2128_3_1184
Type: CAZyme
Location: 1403847 - 1405154 (+)
Type: CAZyme
Location: 1403847 - 1405154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp900066335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2128_3_1178 | vegan > omnivore | 1.07002 | 0.00191 |
| HRGMv2_2128_3_1181 | vegan > omnivore | 3.85379 | 0.00191 |
| HRGMv2_2128_3_1181 | vegetarian > omnivore | 1.64154 | 0.02942 |
| HRGMv2_2128_3_1183 | vegan > omnivore | 7.64960 | 0.00191 |
| HRGMv2_2128_3_1184 | vegan > omnivore | 4.68632 | 0.00191 |