PROTEIN: HRGMv2_2128_3_1182
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2128_3_1182.pdb
Genome ID:
Protein ID:
HRGMv2_2128_3_1182
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MGMNDMLRKM AVLLERRQDA LFSYDVSKQK KYIAKLGNPR DEIERSYFQY KCQMQFNGKG 60 ITFLLNLVSF PVAILYWFKY GKKVQVNRLE HKNLVFFRDG KPENILPKSL KKRYKAIESN 120 PVEGTLLTAK DKKFIKGIIC RYPFSWQFIL KCLIKIGRYS FAIEEYSPEA IAVCAEYSFT 180 SSVLTAYCKQ RNIKHIDVMH GEKMYYMRDS FFKFDECYIW DEYYGKILAS MKADKNQFVV 240 EVPASLKFDG ELIRTQKYDY TYYLGAESEE VLKKISKILE QLYKSGNKIS IRPHPRYSNM 300 DIVKKIFTFA DVEDTTQISI EQSLLQSGAA ISLYSTVLNQ ALCNSIPIII DNMSNPENFN 360 KLKELGYVCL YKEHRLLSEV LEKSV 385
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WEL20071.1 | GT0 | 20 | 385 | 1 | 429 | 0.6287 |
0.7316 |
| A0A8T5X4Z2 | GT0 | 24 | 385 | 1 | 442 | 0.5977 |
0.7124 |
| AF-A0A2R4P285-F1-model_v4 | GT0 | 91 | 381 | 1 | 282 | 0.573 |
0.6789 |
| AF-A0A7S9RBF4-F1-model_v4 | GT0 | 91 | 384 | 9 | 290 | 0.5676 |
0.6809 |
| AF-A0A7S9RMM5-F1-model_v4 | GT0 | 91 | 381 | 9 | 290 | 0.5665 |
0.6799 |
| UKN01564.1 | GT4 | 91 | 385 | 1 | 363 | 0.5636 |
0.7515 |
| AF-A0A7S9RJF2-F1-model_v4 | GT0 | 91 | 384 | 9 | 290 | 0.5628 |
0.6756 |
| AF-A7H0H4-F1-model_v4 | GT0 | 92 | 384 | 8 | 291 | 0.5618 |
0.6717 |
| AF-A0A0H4P298-F1-model_v4 | GT28 | 90 | 385 | 36 | 369 | 0.5309 |
0.7145 |
| AF-A0A5P1X173-F1-model_v4 | GT4 | 92 | 385 | 2 | 312 | 0.5246 |
0.6625 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UKN01564.1 | GT4 | 91 | 385 | 1 | 363 | 0.5636 |
0.7515 |
| D2TY83 | GT4 | 91 | 385 | 3 | 328 | 0.5394 |
0.6889 |
| A0A5P1X173 | GT4 | 92 | 385 | 2 | 312 | 0.5246 |
0.6625 |
| QZY29806.1 | GT4 | 91 | 385 | 1 | 349 | 0.5146 |
0.6804 |
| A0A9E8AKK1 | GT4 | 92 | 385 | 4 | 367 | 0.5097 |
0.681 |
| UYU39327.1 | GT4 | 92 | 385 | 1 | 361 | 0.508 |
0.6774 |
| A0A447J9M7 | GT30 | 12 | 385 | 4 | 424 | 0.503 |
0.5799 |
| A0A346NHZ1 | GT30 | 40 | 385 | 33 | 422 | 0.5012 |
0.6145 |
| A0A0E3Y7N6 | GT30 | 40 | 385 | 1 | 387 | 0.5008 |
0.6054 |
| A0A348FVM5 | GT4 | 92 | 385 | 2 | 327 | 0.4964 |
0.6344 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7vza-assembly1.cif.gz_G | 90 | 385 | 1 | 326 | 0.5403 |
0.6846 |
| 7vza-assembly1.cif.gz_D-3 | 90 | 385 | 1 | 325 | 0.5387 |
0.6819 |
| 1v4v-assembly1.cif.gz_B | 91 | 385 | 2 | 330 | 0.5335 |
0.6886 |
| 5n7z-assembly1.cif.gz_A | 91 | 385 | 1 | 323 | 0.5211 |
0.6614 |
| 4fkz-assembly1.cif.gz_B | 91 | 385 | 2 | 334 | 0.5138 |
0.6662 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39622-F1-model_v4 | 25 | 385 | 1 | 424 | 0.5912 |
0.7061 |
| AF-O34539-F1-model_v4 | 91 | 385 | 3 | 353 | 0.4977 |
0.6556 |
| AF-Q8RKJ2-F1-model_v4 | 16 | 385 | 188 | 572 | 0.4621 |
0.598 |