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Cluster: HRGMv2_2122_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2122_4 HRGMv2_2122_4_82 86061 86969 + 9.A.40.1.2
peptidase HRGMv2_2122_4 HRGMv2_2122_4_83 87003 87731 + M20.UNW
STP HRGMv2_2122_4 HRGMv2_2122_4_84 87822 89105 + Aminotran_1_2
CAZyme HRGMv2_2122_4 HRGMv2_2122_4_85 89124 90581 + GT5
peptidase HRGMv2_2122_4 HRGMv2_2122_4_86 90688 91515 + S14.UPW
pfam HRGMv2_2122_4 HRGMv2_2122_4_87 91515 92477 + BacA
TC HRGMv2_2122_4 HRGMv2_2122_4_88 92491 95106 + 3.A.12.1.1
Gene ID: HRGMv2_2122_4_82
Type: TC
Location: 86061 - 86969 (+)
Gene ID: HRGMv2_2122_4_83
Type: peptidase
Location: 87003 - 87731 (+)
Gene ID: HRGMv2_2122_4_84
Type: STP
Location: 87822 - 89105 (+)
Gene ID: HRGMv2_2122_4_85
Type: CAZyme
Location: 89124 - 90581 (+)
Gene ID: HRGMv2_2122_4_86
Type: peptidase
Location: 90688 - 91515 (+)
Gene ID: HRGMv2_2122_4_87
Type: pfam
Location: 91515 - 92477 (+)
Gene ID: HRGMv2_2122_4_88
Type: TC
Location: 92491 - 95106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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