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Cluster: HRGMv2_2122_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2122_3 HRGMv2_2122_3_104 122480 124075 - 2.A.36.6.11
pfam HRGMv2_2122_3 HRGMv2_2122_3_105 124154 124897 - DUF6062
TC HRGMv2_2122_3 HRGMv2_2122_3_106 124989 126323 - 1.B.52.2.2
CAZyme HRGMv2_2122_3 HRGMv2_2122_3_107 126376 127683 - GH13_20
TC HRGMv2_2122_3 HRGMv2_2122_3_108 128031 130664 - 3.A.3.5.15
pfam HRGMv2_2122_3 HRGMv2_2122_3_109 130679 130993 - Trns_repr_metal
TC HRGMv2_2122_3 HRGMv2_2122_3_110 131453 132796 + 2.A.66.1.7
Gene ID: HRGMv2_2122_3_104
Type: TC
Location: 122480 - 124075 (-)
Gene ID: HRGMv2_2122_3_105
Type: pfam
Location: 124154 - 124897 (-)
Gene ID: HRGMv2_2122_3_106
Type: TC
Location: 124989 - 126323 (-)
Gene ID: HRGMv2_2122_3_107
Type: CAZyme
Location: 126376 - 127683 (-)
Gene ID: HRGMv2_2122_3_108
Type: TC
Location: 128031 - 130664 (-)
Gene ID: HRGMv2_2122_3_109
Type: pfam
Location: 130679 - 130993 (-)
Gene ID: HRGMv2_2122_3_110
Type: TC
Location: 131453 - 132796 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2122_3_105 vegetarian > vegan 2.02384 0.03201
HRGMv2_2122_3_109 vegetarian > vegan 1.67629 0.03201

🧭 Explore Read Mapping of CGC

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