dbCAN Logo

Cluster: HRGMv2_2122_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2122_15 HRGMv2_2122_15_34 37850 40585 - GH94
TC HRGMv2_2122_15 HRGMv2_2122_15_35 40602 41459 - 3.A.1.1.41
TC HRGMv2_2122_15 HRGMv2_2122_15_36 41463 42350 - 3.A.1.1.7
TC HRGMv2_2122_15 HRGMv2_2122_15_37 42406 43683 - 3.A.1.1.25
TF HRGMv2_2122_15 HRGMv2_2122_15_38 43911 44855 - HTH_AraC | HTH_AraC
pfam HRGMv2_2122_15 HRGMv2_2122_15_39 44885 45592 - Hydrolase | Hydrolase_like | HAD_2
TC HRGMv2_2122_15 HRGMv2_2122_15_40 45625 47016 - 1.A.26.1.3
Gene ID: HRGMv2_2122_15_34
Type: CAZyme
Location: 37850 - 40585 (-)
Gene ID: HRGMv2_2122_15_35
Type: TC
Location: 40602 - 41459 (-)
Gene ID: HRGMv2_2122_15_36
Type: TC
Location: 41463 - 42350 (-)
Gene ID: HRGMv2_2122_15_37
Type: TC
Location: 42406 - 43683 (-)
Gene ID: HRGMv2_2122_15_38
Type: TF
Location: 43911 - 44855 (-)
Gene ID: HRGMv2_2122_15_39
Type: pfam
Location: 44885 - 45592 (-)
Gene ID: HRGMv2_2122_15_40
Type: TC
Location: 45625 - 47016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List