Cluster: HRGMv2_2122_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2122
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2122_1 | HRGMv2_2122_1_168 | 153712 | 155451 | - | 1.B.52.2.1 |
| CAZyme | HRGMv2_2122_1 | HRGMv2_2122_1_169 | 155465 | 158005 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2122_1 | HRGMv2_2122_1_170 | 158039 | 159721 | - | GH3 |
Gene ID: HRGMv2_2122_1_168
Type: TC
Location: 153712 - 155451 (-)
Type: TC
Location: 153712 - 155451 (-)
Gene ID: HRGMv2_2122_1_169
Type: CAZyme
Location: 155465 - 158005 (-)
Type: CAZyme
Location: 155465 - 158005 (-)
Gene ID: HRGMv2_2122_1_170
Type: CAZyme
Location: 158039 - 159721 (-)
Type: CAZyme
Location: 158039 - 159721 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Species
Roseburia_C amylophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.