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Cluster: HRGMv2_2122_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2122_8 HRGMv2_2122_8_45 55184 56560 - 2.A.66.1.23
NULL(UNKNOWN) HRGMv2_2122_8 HRGMv2_2122_8_46 56562 56981 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2122_8 HRGMv2_2122_8_47 57044 59449 - GH36
TC HRGMv2_2122_8 HRGMv2_2122_8_48 59446 60828 - 2.A.2.1.1
pfam HRGMv2_2122_8 HRGMv2_2122_8_49 60825 62309 - DUF6937 | DUF6938
CAZyme HRGMv2_2122_8 HRGMv2_2122_8_50 62337 64745 - GH2
STP HRGMv2_2122_8 HRGMv2_2122_8_51 64806 65369 - TetR_N
TC HRGMv2_2122_8 HRGMv2_2122_8_52 65627 66985 - 2.A.40.7.2
STP HRGMv2_2122_8 HRGMv2_2122_8_53 67065 67589 - Pribosyltran
CAZyme HRGMv2_2122_8 HRGMv2_2122_8_54 67788 68903 + GT28
Gene ID: HRGMv2_2122_8_45
Type: TC
Location: 55184 - 56560 (-)
Gene ID: HRGMv2_2122_8_46
Type:
Location: 56562 - 56981 (-)
Gene ID: HRGMv2_2122_8_47
Type: CAZyme
Location: 57044 - 59449 (-)
Gene ID: HRGMv2_2122_8_48
Type: TC
Location: 59446 - 60828 (-)
Gene ID: HRGMv2_2122_8_49
Type: pfam
Location: 60825 - 62309 (-)
Gene ID: HRGMv2_2122_8_50
Type: CAZyme
Location: 62337 - 64745 (-)
Gene ID: HRGMv2_2122_8_51
Type: STP
Location: 64806 - 65369 (-)
Gene ID: HRGMv2_2122_8_52
Type: TC
Location: 65627 - 66985 (-)
Gene ID: HRGMv2_2122_8_53
Type: STP
Location: 67065 - 67589 (-)
Gene ID: HRGMv2_2122_8_54
Type: CAZyme
Location: 67788 - 68903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2122_8_53 vegan > omnivore 1.23044 0.00701

🧭 Explore Read Mapping of CGC

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