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Cluster: HRGMv2_2122_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2122_6 HRGMv2_2122_6_34 38021 39433 + 3.A.1.104.1
TC HRGMv2_2122_6 HRGMv2_2122_6_35 39447 40757 + 3.A.1.103.6
pfam HRGMv2_2122_6 HRGMv2_2122_6_36 40782 41705 + Methyltransf_25
NULL(UNKNOWN) HRGMv2_2122_6 HRGMv2_2122_6_37 41707 43125 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2122_6 HRGMv2_2122_6_38 43145 47587 + GT2 | GT2
CAZyme HRGMv2_2122_6 HRGMv2_2122_6_39 47595 49160 + GH73
pfam HRGMv2_2122_6 HRGMv2_2122_6_40 49168 50253 + DUF6077
NULL(UNKNOWN) HRGMv2_2122_6 HRGMv2_2122_6_41 50265 51137 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2122_6 HRGMv2_2122_6_42 51162 52550 + 9.B.18.1.3
CAZyme HRGMv2_2122_6 HRGMv2_2122_6_43 52578 53822 + GT4
Gene ID: HRGMv2_2122_6_34
Type: TC
Location: 38021 - 39433 (+)
Gene ID: HRGMv2_2122_6_35
Type: TC
Location: 39447 - 40757 (+)
Gene ID: HRGMv2_2122_6_36
Type: pfam
Location: 40782 - 41705 (+)
Gene ID: HRGMv2_2122_6_37
Type:
Location: 41707 - 43125 (+)
Gene ID: HRGMv2_2122_6_38
Type: CAZyme
Location: 43145 - 47587 (+)
Gene ID: HRGMv2_2122_6_39
Type: CAZyme
Location: 47595 - 49160 (+)
Gene ID: HRGMv2_2122_6_40
Type: pfam
Location: 49168 - 50253 (+)
Gene ID: HRGMv2_2122_6_41
Type:
Location: 50265 - 51137 (+)
Gene ID: HRGMv2_2122_6_42
Type: TC
Location: 51162 - 52550 (+)
Gene ID: HRGMv2_2122_6_43
Type: CAZyme
Location: 52578 - 53822 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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