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Cluster: HRGMv2_2121_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_3 HRGMv2_2121_3_64 66697 68442 - 2.A.21.9.2
pfam HRGMv2_2121_3 HRGMv2_2121_3_65 68631 71804 - GtrA_DPMS_TM | YfhO
CAZyme HRGMv2_2121_3 HRGMv2_2121_3_66 71893 74166 - CBM4 | GH9
pfam HRGMv2_2121_3 HRGMv2_2121_3_67 74168 74944 - His_biosynth
TC HRGMv2_2121_3 HRGMv2_2121_3_68 75134 76543 + 3.A.24.3.1
TC HRGMv2_2121_3 HRGMv2_2121_3_69 76614 77285 + 9.B.28.1.3
TC HRGMv2_2121_3 HRGMv2_2121_3_70 77282 77992 - 3.A.11.1.4
TC HRGMv2_2121_3 HRGMv2_2121_3_71 78001 80328 - 3.A.7.16.1
TC HRGMv2_2121_3 HRGMv2_2121_3_72 80364 81356 - 9.B.157.1.1
Gene ID: HRGMv2_2121_3_64
Type: TC
Location: 66697 - 68442 (-)
Gene ID: HRGMv2_2121_3_65
Type: pfam
Location: 68631 - 71804 (-)
Gene ID: HRGMv2_2121_3_66
Type: CAZyme
Location: 71893 - 74166 (-)
Gene ID: HRGMv2_2121_3_67
Type: pfam
Location: 74168 - 74944 (-)
Gene ID: HRGMv2_2121_3_68
Type: TC
Location: 75134 - 76543 (+)
Gene ID: HRGMv2_2121_3_69
Type: TC
Location: 76614 - 77285 (+)
Gene ID: HRGMv2_2121_3_70
Type: TC
Location: 77282 - 77992 (-)
Gene ID: HRGMv2_2121_3_71
Type: TC
Location: 78001 - 80328 (-)
Gene ID: HRGMv2_2121_3_72
Type: TC
Location: 80364 - 81356 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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