Cluster: HRGMv2_2121_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_2 | HRGMv2_2121_2_144 | 167917 | 169749 | - | GT2 |
| TC | HRGMv2_2121_2 | HRGMv2_2121_2_145 | 169812 | 170702 | - | 3.A.1.103.5 |
| TC | HRGMv2_2121_2 | HRGMv2_2121_2_146 | 170714 | 171502 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_2121_2 | HRGMv2_2121_2_147 | 171529 | 172563 | - | GT2 |
| CAZyme | HRGMv2_2121_2 | HRGMv2_2121_2_148 | 172556 | 173344 | - | GT2 |
Gene ID: HRGMv2_2121_2_144
Type: CAZyme
Location: 167917 - 169749 (-)
Type: CAZyme
Location: 167917 - 169749 (-)
Gene ID: HRGMv2_2121_2_145
Type: TC
Location: 169812 - 170702 (-)
Type: TC
Location: 169812 - 170702 (-)
Gene ID: HRGMv2_2121_2_146
Type: TC
Location: 170714 - 171502 (-)
Type: TC
Location: 170714 - 171502 (-)
Gene ID: HRGMv2_2121_2_147
Type: CAZyme
Location: 171529 - 172563 (-)
Type: CAZyme
Location: 171529 - 172563 (-)
Gene ID: HRGMv2_2121_2_148
Type: CAZyme
Location: 172556 - 173344 (-)
Type: CAZyme
Location: 172556 - 173344 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.