Cluster: HRGMv2_2121_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_2 | HRGMv2_2121_2_124 | 138764 | 140857 | - | CBM34 | GH13_39 |
| pfam | HRGMv2_2121_2 | HRGMv2_2121_2_125 | 141203 | 142552 | - | DUF676 |
| TC | HRGMv2_2121_2 | HRGMv2_2121_2_126 | 142747 | 144672 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2121_2_124
Type: CAZyme
Location: 138764 - 140857 (-)
Type: CAZyme
Location: 138764 - 140857 (-)
Gene ID: HRGMv2_2121_2_125
Type: pfam
Location: 141203 - 142552 (-)
Type: pfam
Location: 141203 - 142552 (-)
Gene ID: HRGMv2_2121_2_126
Type: TC
Location: 142747 - 144672 (-)
Type: TC
Location: 142747 - 144672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.