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Cluster: HRGMv2_2121_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_14 HRGMv2_2121_14_33 19077 20261 + 2.A.4.7.6
STP HRGMv2_2121_14 HRGMv2_2121_14_34 20485 21282 + SBP_bac_3
TC HRGMv2_2121_14 HRGMv2_2121_14_35 21334 22020 + 3.A.1.3.14
TC HRGMv2_2121_14 HRGMv2_2121_14_36 22121 22900 + 3.A.1.3.14
STP HRGMv2_2121_14 HRGMv2_2121_14_37 23024 23224 + HATPase_c
pfam HRGMv2_2121_14 HRGMv2_2121_14_38 23366 23800 - Cupin_1 | Cupin_2
TC HRGMv2_2121_14 HRGMv2_2121_14_39 24095 25432 + 3.A.1.1.45
TC HRGMv2_2121_14 HRGMv2_2121_14_40 25701 26543 + 3.A.1.1.45
TC HRGMv2_2121_14 HRGMv2_2121_14_41 26543 27436 + 3.A.1.1.45
CAZyme HRGMv2_2121_14 HRGMv2_2121_14_42 27519 29018 + GH77
Gene ID: HRGMv2_2121_14_33
Type: TC
Location: 19077 - 20261 (+)
Gene ID: HRGMv2_2121_14_34
Type: STP
Location: 20485 - 21282 (+)
Gene ID: HRGMv2_2121_14_35
Type: TC
Location: 21334 - 22020 (+)
Gene ID: HRGMv2_2121_14_36
Type: TC
Location: 22121 - 22900 (+)
Gene ID: HRGMv2_2121_14_37
Type: STP
Location: 23024 - 23224 (+)
Gene ID: HRGMv2_2121_14_38
Type: pfam
Location: 23366 - 23800 (-)
Gene ID: HRGMv2_2121_14_39
Type: TC
Location: 24095 - 25432 (+)
Gene ID: HRGMv2_2121_14_40
Type: TC
Location: 25701 - 26543 (+)
Gene ID: HRGMv2_2121_14_41
Type: TC
Location: 26543 - 27436 (+)
Gene ID: HRGMv2_2121_14_42
Type: CAZyme
Location: 27519 - 29018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2121_14_35 vegan > omnivore 1.07429 0.01478
HRGMv2_2121_14_35 vegetarian > omnivore 1.22399 0.00565

🧭 Explore Read Mapping of CGC

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