Cluster: HRGMv2_2121_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_12 | HRGMv2_2121_12_78 | 92036 | 92977 | - | GH26 |
| TF | HRGMv2_2121_12 | HRGMv2_2121_12_79 | 93114 | 93965 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2121_12 | HRGMv2_2121_12_80 | 94036 | 95436 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2121_12_78
Type: CAZyme
Location: 92036 - 92977 (-)
Type: CAZyme
Location: 92036 - 92977 (-)
Gene ID: HRGMv2_2121_12_79
Type: TF
Location: 93114 - 93965 (+)
Type: TF
Location: 93114 - 93965 (+)
Gene ID: HRGMv2_2121_12_80
Type: TC
Location: 94036 - 95436 (-)
Type: TC
Location: 94036 - 95436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.