Cluster: HRGMv2_2121_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_11 | HRGMv2_2121_11_27 | 27157 | 28329 | + | GT4 |
| TF | HRGMv2_2121_11 | HRGMv2_2121_11_28 | 28699 | 29055 | + | GntR |
| TC | HRGMv2_2121_11 | HRGMv2_2121_11_29 | 29086 | 29772 | + | 3.A.1.132.6 |
Gene ID: HRGMv2_2121_11_27
Type: CAZyme
Location: 27157 - 28329 (+)
Type: CAZyme
Location: 27157 - 28329 (+)
Gene ID: HRGMv2_2121_11_28
Type: TF
Location: 28699 - 29055 (+)
Type: TF
Location: 28699 - 29055 (+)
Gene ID: HRGMv2_2121_11_29
Type: TC
Location: 29086 - 29772 (+)
Type: TC
Location: 29086 - 29772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.