Cluster: HRGMv2_2121_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_9 | HRGMv2_2121_9_23 | 20543 | 22132 | + | GH43_35 |
| TC | HRGMv2_2121_9 | HRGMv2_2121_9_24 | 22157 | 23485 | + | 2.A.35.1.5 |
| TC | HRGMv2_2121_9 | HRGMv2_2121_9_25 | 23650 | 25065 | + | 2.A.25.1.4 |
Gene ID: HRGMv2_2121_9_23
Type: CAZyme
Location: 20543 - 22132 (+)
Type: CAZyme
Location: 20543 - 22132 (+)
Gene ID: HRGMv2_2121_9_24
Type: TC
Location: 22157 - 23485 (+)
Type: TC
Location: 22157 - 23485 (+)
Gene ID: HRGMv2_2121_9_25
Type: TC
Location: 23650 - 25065 (+)
Type: TC
Location: 23650 - 25065 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.