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Cluster: HRGMv2_2121_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_5 HRGMv2_2121_5_125 139056 139679 + 9.A.11.1.1
TC HRGMv2_2121_5 HRGMv2_2121_5_126 139669 140085 + 9.A.11.1.1
TC HRGMv2_2121_5 HRGMv2_2121_5_127 140114 140563 + 9.A.11.1.1
pfam HRGMv2_2121_5 HRGMv2_2121_5_128 140677 141057 + DUF3783
pfam HRGMv2_2121_5 HRGMv2_2121_5_129 141081 142763 + VanW | G5
TC HRGMv2_2121_5 HRGMv2_2121_5_130 142809 144161 - 2.A.49.9.2
TC HRGMv2_2121_5 HRGMv2_2121_5_131 144351 145379 + 9.A.11.1.1
pfam HRGMv2_2121_5 HRGMv2_2121_5_132 145383 145739 + SpoVAC_SpoVAEB
CAZyme HRGMv2_2121_5 HRGMv2_2121_5_133 145822 148563 - GT51
Gene ID: HRGMv2_2121_5_125
Type: TC
Location: 139056 - 139679 (+)
Gene ID: HRGMv2_2121_5_126
Type: TC
Location: 139669 - 140085 (+)
Gene ID: HRGMv2_2121_5_127
Type: TC
Location: 140114 - 140563 (+)
Gene ID: HRGMv2_2121_5_128
Type: pfam
Location: 140677 - 141057 (+)
Gene ID: HRGMv2_2121_5_129
Type: pfam
Location: 141081 - 142763 (+)
Gene ID: HRGMv2_2121_5_130
Type: TC
Location: 142809 - 144161 (-)
Gene ID: HRGMv2_2121_5_131
Type: TC
Location: 144351 - 145379 (+)
Gene ID: HRGMv2_2121_5_132
Type: pfam
Location: 145383 - 145739 (+)
Gene ID: HRGMv2_2121_5_133
Type: CAZyme
Location: 145822 - 148563 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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