Cluster: HRGMv2_2121_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2121
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2121_5 | HRGMv2_2121_5_8 | 7071 | 8558 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2121_5 | HRGMv2_2121_5_9 | 8584 | 9330 | + | GT2 |
| pfam | HRGMv2_2121_5 | HRGMv2_2121_5_10 | 9377 | 9571 | + | RHH_1 | HicB |
| pfam | HRGMv2_2121_5 | HRGMv2_2121_5_11 | 9625 | 10968 | - | UDPGP |
| CAZyme | HRGMv2_2121_5 | HRGMv2_2121_5_12 | 10913 | 11644 | - | GT2 |
Gene ID: HRGMv2_2121_5_8
Type: TC
Location: 7071 - 8558 (+)
Type: TC
Location: 7071 - 8558 (+)
Gene ID: HRGMv2_2121_5_9
Type: CAZyme
Location: 8584 - 9330 (+)
Type: CAZyme
Location: 8584 - 9330 (+)
Gene ID: HRGMv2_2121_5_10
Type: pfam
Location: 9377 - 9571 (+)
Type: pfam
Location: 9377 - 9571 (+)
Gene ID: HRGMv2_2121_5_11
Type: pfam
Location: 9625 - 10968 (-)
Type: pfam
Location: 9625 - 10968 (-)
Gene ID: HRGMv2_2121_5_12
Type: CAZyme
Location: 10913 - 11644 (-)
Type: CAZyme
Location: 10913 - 11644 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.