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Cluster: HRGMv2_2107_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2107_1 HRGMv2_2107_1_2229 2555927 2557426 + 3.A.1.2.20
TC HRGMv2_2107_1 HRGMv2_2107_1_2230 2557428 2558447 + 3.A.1.2.15
CAZyme HRGMv2_2107_1 HRGMv2_2107_1_2231 2558469 2559947 + GH32
Gene ID: HRGMv2_2107_1_2229
Type: TC
Location: 2555927 - 2557426 (+)
Gene ID: HRGMv2_2107_1_2230
Type: TC
Location: 2557428 - 2558447 (+)
Gene ID: HRGMv2_2107_1_2231
Type: CAZyme
Location: 2558469 - 2559947 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2107_1_2230 vegetarian > omnivore 1.04888 0.02445

🧭 Explore Read Mapping of CGC

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