Cluster: HRGMv2_2106_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2106_35 | HRGMv2_2106_35_8 | 7060 | 9078 | - | 4.A.2.1.20 |
| STP | HRGMv2_2106_35 | HRGMv2_2106_35_9 | 9097 | 10011 | - | PfkB |
| TF | HRGMv2_2106_35 | HRGMv2_2106_35_10 | 10101 | 10853 | - | HTH_DeoR |
| TC | HRGMv2_2106_35 | HRGMv2_2106_35_11 | 11383 | 13236 | - | 3.A.1.135.6 |
| TC | HRGMv2_2106_35 | HRGMv2_2106_35_12 | 13236 | 15548 | - | 3.A.1.135.6 |
| TF | HRGMv2_2106_35 | HRGMv2_2106_35_13 | 15532 | 15999 | - | MarR |
| CAZyme | HRGMv2_2106_35 | HRGMv2_2106_35_14 | 16222 | 18345 | - | GH13_20 |
Gene ID: HRGMv2_2106_35_8
Type: TC
Location: 7060 - 9078 (-)
Type: TC
Location: 7060 - 9078 (-)
Gene ID: HRGMv2_2106_35_9
Type: STP
Location: 9097 - 10011 (-)
Type: STP
Location: 9097 - 10011 (-)
Gene ID: HRGMv2_2106_35_10
Type: TF
Location: 10101 - 10853 (-)
Type: TF
Location: 10101 - 10853 (-)
Gene ID: HRGMv2_2106_35_11
Type: TC
Location: 11383 - 13236 (-)
Type: TC
Location: 11383 - 13236 (-)
Gene ID: HRGMv2_2106_35_12
Type: TC
Location: 13236 - 15548 (-)
Type: TC
Location: 13236 - 15548 (-)
Gene ID: HRGMv2_2106_35_13
Type: TF
Location: 15532 - 15999 (-)
Type: TF
Location: 15532 - 15999 (-)
Gene ID: HRGMv2_2106_35_14
Type: CAZyme
Location: 16222 - 18345 (-)
Type: CAZyme
Location: 16222 - 18345 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.