Cluster: HRGMv2_2106_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2106
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2106_25 | HRGMv2_2106_25_26 | 34358 | 35425 | - | GT2 |
| TC | HRGMv2_2106_25 | HRGMv2_2106_25_27 | 35906 | 37351 | + | 2.A.114.1.4 |
| NULL(UNKNOWN) | HRGMv2_2106_25 | HRGMv2_2106_25_28 | 37390 | 38397 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2106_25 | HRGMv2_2106_25_29 | 38818 | 39741 | + | 2.A.69.4.3 |
Gene ID: HRGMv2_2106_25_26
Type: CAZyme
Location: 34358 - 35425 (-)
Type: CAZyme
Location: 34358 - 35425 (-)
Gene ID: HRGMv2_2106_25_27
Type: TC
Location: 35906 - 37351 (+)
Type: TC
Location: 35906 - 37351 (+)
Gene ID: HRGMv2_2106_25_28
Type:
Location: 37390 - 38397 (+)
Type:
Location: 37390 - 38397 (+)
Gene ID: HRGMv2_2106_25_29
Type: TC
Location: 38818 - 39741 (+)
Type: TC
Location: 38818 - 39741 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900545725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2106_25_28 | vegetarian > vegan | 4.99927 | 0.00180 |