Cluster: HRGMv2_2105_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2105
- CGC Family ID: CGCFAM_06095
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_365 | 403741 | 406395 | - | 3.A.1.122.2 |
| pfam | HRGMv2_2105_1 | HRGMv2_2105_1_366 | 406765 | 407904 | + | Hydrolase_2 | CC_PcsB |
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_367 | 408000 | 409628 | - | CBM91 | GH43_10 |
Gene ID: HRGMv2_2105_1_365
Type: TC
Location: 403741 - 406395 (-)
Type: TC
Location: 403741 - 406395 (-)
Gene ID: HRGMv2_2105_1_366
Type: pfam
Location: 406765 - 407904 (+)
Type: pfam
Location: 406765 - 407904 (+)
Gene ID: HRGMv2_2105_1_367
Type: CAZyme
Location: 408000 - 409628 (-)
Type: CAZyme
Location: 408000 - 409628 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000437735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2105_1_366 | vegetarian > vegan | 1.10272 | 0.01276 |