Cluster: HRGMv2_2105_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_246 | 286224 | 287471 | - | 9.A.40.2.1 |
| pfam | HRGMv2_2105_1 | HRGMv2_2105_1_247 | 287588 | 288481 | - | Transposase_31 |
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_248 | 288616 | 293160 | - | CBM13 |
Gene ID: HRGMv2_2105_1_246
Type: TC
Location: 286224 - 287471 (-)
Type: TC
Location: 286224 - 287471 (-)
Gene ID: HRGMv2_2105_1_247
Type: pfam
Location: 287588 - 288481 (-)
Type: pfam
Location: 287588 - 288481 (-)
Gene ID: HRGMv2_2105_1_248
Type: CAZyme
Location: 288616 - 293160 (-)
Type: CAZyme
Location: 288616 - 293160 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000437735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2105_1_247 | vegetarian > vegan | 1.59582 | 0.01276 |