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Cluster: HRGMv2_2105_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2105_2 HRGMv2_2105_2_235 258802 260190 - GH1
CAZyme HRGMv2_2105_2 HRGMv2_2105_2_236 260213 262657 - GH94
TF HRGMv2_2105_2 HRGMv2_2105_2_237 263026 264033 + LacI
NULL(UNKNOWN) HRGMv2_2105_2 HRGMv2_2105_2_238 264058 265428 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2105_2 HRGMv2_2105_2_239 265549 266493 + 3.A.1.1.4
TC HRGMv2_2105_2 HRGMv2_2105_2_240 266497 267372 + 3.A.1.1.36
TF HRGMv2_2105_2 HRGMv2_2105_2_241 267664 268101 + FUR
TC HRGMv2_2105_2 HRGMv2_2105_2_242 268082 269164 + 3.A.1.15.11
TC HRGMv2_2105_2 HRGMv2_2105_2_243 269226 269939 + 3.A.1.15.8
TC HRGMv2_2105_2 HRGMv2_2105_2_244 269932 270780 + 3.A.1.15.5
TF HRGMv2_2105_2 HRGMv2_2105_2_245 271275 271574 + HTH_5
TC HRGMv2_2105_2 HRGMv2_2105_2_246 271571 272569 + 2.A.119.1.3
Gene ID: HRGMv2_2105_2_235
Type: CAZyme
Location: 258802 - 260190 (-)
Gene ID: HRGMv2_2105_2_236
Type: CAZyme
Location: 260213 - 262657 (-)
Gene ID: HRGMv2_2105_2_237
Type: TF
Location: 263026 - 264033 (+)
Gene ID: HRGMv2_2105_2_238
Type:
Location: 264058 - 265428 (+)
Gene ID: HRGMv2_2105_2_239
Type: TC
Location: 265549 - 266493 (+)
Gene ID: HRGMv2_2105_2_240
Type: TC
Location: 266497 - 267372 (+)
Gene ID: HRGMv2_2105_2_241
Type: TF
Location: 267664 - 268101 (+)
Gene ID: HRGMv2_2105_2_242
Type: TC
Location: 268082 - 269164 (+)
Gene ID: HRGMv2_2105_2_243
Type: TC
Location: 269226 - 269939 (+)
Gene ID: HRGMv2_2105_2_244
Type: TC
Location: 269932 - 270780 (+)
Gene ID: HRGMv2_2105_2_245
Type: TF
Location: 271275 - 271574 (+)
Gene ID: HRGMv2_2105_2_246
Type: TC
Location: 271571 - 272569 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2105_2_241 vegetarian > vegan 2.14225 0.01276
HRGMv2_2105_2_242 vegetarian > vegan 2.76920 0.01276

🧭 Explore Read Mapping of CGC

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