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Cluster: HRGMv2_2105_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2105_2 HRGMv2_2105_2_160 176066 180772 + GH28
pfam HRGMv2_2105_2 HRGMv2_2105_2_161 180881 182059 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
pfam HRGMv2_2105_2 HRGMv2_2105_2_162 182340 183554 + Thy1
TC HRGMv2_2105_2 HRGMv2_2105_2_163 183683 185062 + 2.A.2.3.1
TC HRGMv2_2105_2 HRGMv2_2105_2_164 185212 186642 + 1.B.52.2.1
TC HRGMv2_2105_2 HRGMv2_2105_2_165 186804 187160 - 2.A.8.1.9
Gene ID: HRGMv2_2105_2_160
Type: CAZyme
Location: 176066 - 180772 (+)
Gene ID: HRGMv2_2105_2_161
Type: pfam
Location: 180881 - 182059 (-)
Gene ID: HRGMv2_2105_2_162
Type: pfam
Location: 182340 - 183554 (+)
Gene ID: HRGMv2_2105_2_163
Type: TC
Location: 183683 - 185062 (+)
Gene ID: HRGMv2_2105_2_164
Type: TC
Location: 185212 - 186642 (+)
Gene ID: HRGMv2_2105_2_165
Type: TC
Location: 186804 - 187160 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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