Cluster: HRGMv2_2105_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2105
- CGC Family ID: CGCFAM_01402
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_2398 | 2652204 | 2652941 | - | GH23 |
| STP | HRGMv2_2105_1 | HRGMv2_2105_1_2399 | 2652955 | 2653389 | - | NUDIX |
| pfam | HRGMv2_2105_1 | HRGMv2_2105_1_2400 | 2653486 | 2654823 | - | Transpeptidase | PBP_dimer_2 |
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_2401 | 2654885 | 2656270 | - | 2.A.103.1.7 |
Gene ID: HRGMv2_2105_1_2398
Type: CAZyme
Location: 2652204 - 2652941 (-)
Type: CAZyme
Location: 2652204 - 2652941 (-)
Gene ID: HRGMv2_2105_1_2399
Type: STP
Location: 2652955 - 2653389 (-)
Type: STP
Location: 2652955 - 2653389 (-)
Gene ID: HRGMv2_2105_1_2400
Type: pfam
Location: 2653486 - 2654823 (-)
Type: pfam
Location: 2653486 - 2654823 (-)
Gene ID: HRGMv2_2105_1_2401
Type: TC
Location: 2654885 - 2656270 (-)
Type: TC
Location: 2654885 - 2656270 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000437735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.