Cluster: HRGMv2_2105_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_158 | 164427 | 166181 | - | 1.A.33.1.4 |
| peptidase | HRGMv2_2105_1 | HRGMv2_2105_1_159 | 166335 | 167324 | - | M19.UPW |
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_160 | 167675 | 169489 | - | PL9_1 |
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_161 | 169875 | 171314 | - | 9.A.11.1.1 |
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_162 | 171495 | 177992 | - | CE8 | PL1_2 |
Gene ID: HRGMv2_2105_1_158
Type: TC
Location: 164427 - 166181 (-)
Type: TC
Location: 164427 - 166181 (-)
Gene ID: HRGMv2_2105_1_159
Type: peptidase
Location: 166335 - 167324 (-)
Type: peptidase
Location: 166335 - 167324 (-)
Gene ID: HRGMv2_2105_1_160
Type: CAZyme
Location: 167675 - 169489 (-)
Type: CAZyme
Location: 167675 - 169489 (-)
Gene ID: HRGMv2_2105_1_161
Type: TC
Location: 169875 - 171314 (-)
Type: TC
Location: 169875 - 171314 (-)
Gene ID: HRGMv2_2105_1_162
Type: CAZyme
Location: 171495 - 177992 (-)
Type: CAZyme
Location: 171495 - 177992 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000437735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2105_1_159 | vegetarian > vegan | 1.12340 | 0.01276 |