dbCAN HGM

Cluster: HRGMv2_2105_CGC17

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2105_1	HRGMv2_2105_1_1086	1222114	1223523	+	9.B.18.1.2
NULL(UNKNOWN)	HRGMv2_2105_1	HRGMv2_2105_1_1087	1223576	1224055	+	NULL(UNKNOWN) [View Structural Homologs]
NULL(UNKNOWN)	HRGMv2_2105_1	HRGMv2_2105_1_1088	1224006	1224140	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2105_1	HRGMv2_2105_1_1089	1224091	1225206	+	GT4
CAZyme	HRGMv2_2105_1	HRGMv2_2105_1_1090	1225254	1226126	+	GT2
CAZyme	HRGMv2_2105_1	HRGMv2_2105_1_1091	1226123	1227184	+	GT4
NULL(UNKNOWN)	HRGMv2_2105_1	HRGMv2_2105_1_1092	1227199	1228494	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2105_1	HRGMv2_2105_1_1093	1228514	1229644	+	GT4
CAZyme	HRGMv2_2105_1	HRGMv2_2105_1_1094	1229660	1230829	+	GT4

Gene ID: HRGMv2_2105_1_1086
Type: TC
Location: 1222114 - 1223523 (+)

Gene ID: HRGMv2_2105_1_1087
Type:
Location: 1223576 - 1224055 (+)

Gene ID: HRGMv2_2105_1_1088
Type:
Location: 1224006 - 1224140 (+)

Gene ID: HRGMv2_2105_1_1089
Type: CAZyme
Location: 1224091 - 1225206 (+)

Gene ID: HRGMv2_2105_1_1090
Type: CAZyme
Location: 1225254 - 1226126 (+)

Gene ID: HRGMv2_2105_1_1091
Type: CAZyme
Location: 1226123 - 1227184 (+)

Gene ID: HRGMv2_2105_1_1092
Type:
Location: 1227199 - 1228494 (+)

Gene ID: HRGMv2_2105_1_1093
Type: CAZyme
Location: 1228514 - 1229644 (+)

Gene ID: HRGMv2_2105_1_1094
Type: CAZyme
Location: 1229660 - 1230829 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.