Cluster: HRGMv2_2105_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2105_1 | HRGMv2_2105_1_1080 | 1216450 | 1217367 | + | GT2 |
| pfam | HRGMv2_2105_1 | HRGMv2_2105_1_1081 | 1217458 | 1218858 | + | Lipase_GDSL_2 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 | Choline_bind_4 |
| TC | HRGMv2_2105_1 | HRGMv2_2105_1_1082 | 1219083 | 1220024 | + | 1.A.35.3.2 |
Gene ID: HRGMv2_2105_1_1080
Type: CAZyme
Location: 1216450 - 1217367 (+)
Type: CAZyme
Location: 1216450 - 1217367 (+)
Gene ID: HRGMv2_2105_1_1081
Type: pfam
Location: 1217458 - 1218858 (+)
Type: pfam
Location: 1217458 - 1218858 (+)
Gene ID: HRGMv2_2105_1_1082
Type: TC
Location: 1219083 - 1220024 (+)
Type: TC
Location: 1219083 - 1220024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000437735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.