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Cluster: HRGMv2_2105_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2105_1 HRGMv2_2105_1_924 1014336 1015340 - 3.A.7.7.1
TF HRGMv2_2105_1 HRGMv2_2105_1_925 1015734 1016027 + HTH_3
NULL(UNKNOWN) HRGMv2_2105_1 HRGMv2_2105_1_926 1016060 1016215 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2105_1 HRGMv2_2105_1_927 1016571 1018640 - 1.B.52.2.1
pfam HRGMv2_2105_1 HRGMv2_2105_1_928 1018757 1019632 - DUF3881
STP HRGMv2_2105_1 HRGMv2_2105_1_929 1019696 1020790 - HD
CAZyme HRGMv2_2105_1 HRGMv2_2105_1_930 1021016 1028350 - CE8 | PL1
sulfatase HRGMv2_2105_1 HRGMv2_2105_1_931 1029023 1030603 - S1_2
pfam HRGMv2_2105_1 HRGMv2_2105_1_932 1030751 1031710 - ApbA | ApbA_C
TC HRGMv2_2105_1 HRGMv2_2105_1_933 1031864 1033045 - 2.A.36.2.1
Gene ID: HRGMv2_2105_1_924
Type: TC
Location: 1014336 - 1015340 (-)
Gene ID: HRGMv2_2105_1_925
Type: TF
Location: 1015734 - 1016027 (+)
Gene ID: HRGMv2_2105_1_926
Type:
Location: 1016060 - 1016215 (-)
Gene ID: HRGMv2_2105_1_927
Type: TC
Location: 1016571 - 1018640 (-)
Gene ID: HRGMv2_2105_1_928
Type: pfam
Location: 1018757 - 1019632 (-)
Gene ID: HRGMv2_2105_1_929
Type: STP
Location: 1019696 - 1020790 (-)
Gene ID: HRGMv2_2105_1_930
Type: CAZyme
Location: 1021016 - 1028350 (-)
Gene ID: HRGMv2_2105_1_931
Type: sulfatase
Location: 1029023 - 1030603 (-)
Gene ID: HRGMv2_2105_1_932
Type: pfam
Location: 1030751 - 1031710 (-)
Gene ID: HRGMv2_2105_1_933
Type: TC
Location: 1031864 - 1033045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2105_1_932 vegetarian > vegan 1.54888 0.01276
HRGMv2_2105_1_933 vegetarian > vegan 1.44665 0.01276

🧭 Explore Read Mapping of CGC

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