Cluster: HRGMv2_2094_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2094_3 | HRGMv2_2094_3_13 | 15656 | 18112 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2094_3 | HRGMv2_2094_3_14 | 18151 | 20409 | - | Cadherin-like |
| CAZyme | HRGMv2_2094_3 | HRGMv2_2094_3_15 | 20483 | 22804 | - | GH73 |
Gene ID: HRGMv2_2094_3_13
Type: TC
Location: 15656 - 18112 (-)
Type: TC
Location: 15656 - 18112 (-)
Gene ID: HRGMv2_2094_3_14
Type: pfam
Location: 18151 - 20409 (-)
Type: pfam
Location: 18151 - 20409 (-)
Gene ID: HRGMv2_2094_3_15
Type: CAZyme
Location: 20483 - 22804 (-)
Type: CAZyme
Location: 20483 - 22804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.