Cluster: HRGMv2_2094_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2094_75 | HRGMv2_2094_75_1 | 106 | 2322 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_2094_75 | HRGMv2_2094_75_2 | 2444 | 3430 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2094_75 | HRGMv2_2094_75_3 | 3626 | 5269 | - | 1.C.105.2.8 |
Gene ID: HRGMv2_2094_75_1
Type: CAZyme
Location: 106 - 2322 (-)
Type: CAZyme
Location: 106 - 2322 (-)
Gene ID: HRGMv2_2094_75_2
Type:
Location: 2444 - 3430 (-)
Type:
Location: 2444 - 3430 (-)
Gene ID: HRGMv2_2094_75_3
Type: TC
Location: 3626 - 5269 (-)
Type: TC
Location: 3626 - 5269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2094_75_2 | vegetarian > vegan | 2.01386 | 0.00114 |