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Cluster: HRGMv2_2094_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2094_1 HRGMv2_2094_1_148 171947 172297 + 2.A.7.33.5
NULL(UNKNOWN) HRGMv2_2094_1 HRGMv2_2094_1_149 172326 174125 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2094_1 HRGMv2_2094_1_150 174154 175569 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2094_1 HRGMv2_2094_1_151 175585 176976 + 2.A.50.2.1
pfam HRGMv2_2094_1 HRGMv2_2094_1_152 177004 178302 + ALGX
TC HRGMv2_2094_1 HRGMv2_2094_1_153 178336 180912 + 9.B.144.1.5
NULL(UNKNOWN) HRGMv2_2094_1 HRGMv2_2094_1_154 180890 182596 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2094_1 HRGMv2_2094_1_155 182593 183516 + GT11
Gene ID: HRGMv2_2094_1_148
Type: TC
Location: 171947 - 172297 (+)
Gene ID: HRGMv2_2094_1_149
Type:
Location: 172326 - 174125 (+)
Gene ID: HRGMv2_2094_1_150
Type:
Location: 174154 - 175569 (+)
Gene ID: HRGMv2_2094_1_151
Type: TC
Location: 175585 - 176976 (+)
Gene ID: HRGMv2_2094_1_152
Type: pfam
Location: 177004 - 178302 (+)
Gene ID: HRGMv2_2094_1_153
Type: TC
Location: 178336 - 180912 (+)
Gene ID: HRGMv2_2094_1_154
Type:
Location: 180890 - 182596 (+)
Gene ID: HRGMv2_2094_1_155
Type: CAZyme
Location: 182593 - 183516 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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