Cluster: HRGMv2_2094_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2094
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2094_43 | HRGMv2_2094_43_12 | 10449 | 11375 | - | 8.A.21.2.2 |
| pfam | HRGMv2_2094_43 | HRGMv2_2094_43_13 | 11555 | 12838 | - | Hydrolase_2 | SH3_3 | SH3_3 |
| NULL(UNKNOWN) | HRGMv2_2094_43 | HRGMv2_2094_43_14 | 12966 | 13271 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2094_43 | HRGMv2_2094_43_15 | 13530 | 14600 | + | GT28 |
Gene ID: HRGMv2_2094_43_12
Type: TC
Location: 10449 - 11375 (-)
Type: TC
Location: 10449 - 11375 (-)
Gene ID: HRGMv2_2094_43_13
Type: pfam
Location: 11555 - 12838 (-)
Type: pfam
Location: 11555 - 12838 (-)
Gene ID: HRGMv2_2094_43_14
Type:
Location: 12966 - 13271 (-)
Type:
Location: 12966 - 13271 (-)
Gene ID: HRGMv2_2094_43_15
Type: CAZyme
Location: 13530 - 14600 (+)
Type: CAZyme
Location: 13530 - 14600 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.