Cluster: HRGMv2_2094_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2094
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2094_21 | HRGMv2_2094_21_15 | 12989 | 15400 | - | GH36 |
| TC | HRGMv2_2094_21 | HRGMv2_2094_21_16 | 15635 | 17047 | - | 2.A.2.1.1 |
| pfam | HRGMv2_2094_21 | HRGMv2_2094_21_17 | 17085 | 18587 | - | DUF6937 | DUF6938 |
| CAZyme | HRGMv2_2094_21 | HRGMv2_2094_21_18 | 18566 | 21031 | - | GH2 |
Gene ID: HRGMv2_2094_21_15
Type: CAZyme
Location: 12989 - 15400 (-)
Type: CAZyme
Location: 12989 - 15400 (-)
Gene ID: HRGMv2_2094_21_16
Type: TC
Location: 15635 - 17047 (-)
Type: TC
Location: 15635 - 17047 (-)
Gene ID: HRGMv2_2094_21_17
Type: pfam
Location: 17085 - 18587 (-)
Type: pfam
Location: 17085 - 18587 (-)
Gene ID: HRGMv2_2094_21_18
Type: CAZyme
Location: 18566 - 21031 (-)
Type: CAZyme
Location: 18566 - 21031 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.