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Cluster: HRGMv2_2087_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2087_26 HRGMv2_2087_26_7 9919 10824 + 3.A.1.1.11
TC HRGMv2_2087_26 HRGMv2_2087_26_8 10817 11824 + 3.A.1.1.11
pfam HRGMv2_2087_26 HRGMv2_2087_26_9 11929 13341 + SBP_bac_1
CAZyme HRGMv2_2087_26 HRGMv2_2087_26_10 13397 14986 + CBM91 | GH43_12
pfam HRGMv2_2087_26 HRGMv2_2087_26_11 15093 15752 + DUF624
CAZyme HRGMv2_2087_26 HRGMv2_2087_26_12 15815 17407 + GH43_16
CAZyme HRGMv2_2087_26 HRGMv2_2087_26_13 17439 19115 + GH43_27
CAZyme HRGMv2_2087_26 HRGMv2_2087_26_14 19175 20995 + GH146
Gene ID: HRGMv2_2087_26_7
Type: TC
Location: 9919 - 10824 (+)
Gene ID: HRGMv2_2087_26_8
Type: TC
Location: 10817 - 11824 (+)
Gene ID: HRGMv2_2087_26_9
Type: pfam
Location: 11929 - 13341 (+)
Gene ID: HRGMv2_2087_26_10
Type: CAZyme
Location: 13397 - 14986 (+)
Gene ID: HRGMv2_2087_26_11
Type: pfam
Location: 15093 - 15752 (+)
Gene ID: HRGMv2_2087_26_12
Type: CAZyme
Location: 15815 - 17407 (+)
Gene ID: HRGMv2_2087_26_13
Type: CAZyme
Location: 17439 - 19115 (+)
Gene ID: HRGMv2_2087_26_14
Type: CAZyme
Location: 19175 - 20995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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