Cluster: HRGMv2_2087_CGC37
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_24 | HRGMv2_2087_24_1 | 1 | 870 | + | 8.A.59.4.2 |
| STP | HRGMv2_2087_24 | HRGMv2_2087_24_2 | 1153 | 2865 | + | MCPsignal |
| CAZyme | HRGMv2_2087_24 | HRGMv2_2087_24_3 | 3152 | 4870 | + | CBM34 | GH13_20 |
Gene ID: HRGMv2_2087_24_1
Type: TC
Location: 1 - 870 (+)
Type: TC
Location: 1 - 870 (+)
Gene ID: HRGMv2_2087_24_2
Type: STP
Location: 1153 - 2865 (+)
Type: STP
Location: 1153 - 2865 (+)
Gene ID: HRGMv2_2087_24_3
Type: CAZyme
Location: 3152 - 4870 (+)
Type: CAZyme
Location: 3152 - 4870 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2087_24_3 | vegetarian > vegan | 1.01189 | 0.02211 |