Cluster: HRGMv2_2087_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_20 | HRGMv2_2087_20_32 | 28171 | 28794 | + | 9.B.104.1.3 |
| pfam | HRGMv2_2087_20 | HRGMv2_2087_20_33 | 28819 | 29808 | + | SCP2 |
| pfam | HRGMv2_2087_20 | HRGMv2_2087_20_34 | 29820 | 30230 | + | HIT | DcpS_C |
| CAZyme | HRGMv2_2087_20 | HRGMv2_2087_20_35 | 30317 | 31393 | - | GT28 |
Gene ID: HRGMv2_2087_20_32
Type: TC
Location: 28171 - 28794 (+)
Type: TC
Location: 28171 - 28794 (+)
Gene ID: HRGMv2_2087_20_33
Type: pfam
Location: 28819 - 29808 (+)
Type: pfam
Location: 28819 - 29808 (+)
Gene ID: HRGMv2_2087_20_34
Type: pfam
Location: 29820 - 30230 (+)
Type: pfam
Location: 29820 - 30230 (+)
Gene ID: HRGMv2_2087_20_35
Type: CAZyme
Location: 30317 - 31393 (-)
Type: CAZyme
Location: 30317 - 31393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.