Cluster: HRGMv2_2087_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2087_17 | HRGMv2_2087_17_47 | 45146 | 46828 | - | GH13_31 |
| TC | HRGMv2_2087_17 | HRGMv2_2087_17_48 | 46944 | 49130 | - | 9.B.74.1.1 |
| TC | HRGMv2_2087_17 | HRGMv2_2087_17_49 | 49127 | 51667 | - | 9.B.74.1.1 |
| pfam | HRGMv2_2087_17 | HRGMv2_2087_17_50 | 51840 | 54395 | - | FtsX | FtsX |
| TC | HRGMv2_2087_17 | HRGMv2_2087_17_51 | 54398 | 55069 | - | 3.A.1.125.3 |
Gene ID: HRGMv2_2087_17_47
Type: CAZyme
Location: 45146 - 46828 (-)
Type: CAZyme
Location: 45146 - 46828 (-)
Gene ID: HRGMv2_2087_17_48
Type: TC
Location: 46944 - 49130 (-)
Type: TC
Location: 46944 - 49130 (-)
Gene ID: HRGMv2_2087_17_49
Type: TC
Location: 49127 - 51667 (-)
Type: TC
Location: 49127 - 51667 (-)
Gene ID: HRGMv2_2087_17_50
Type: pfam
Location: 51840 - 54395 (-)
Type: pfam
Location: 51840 - 54395 (-)
Gene ID: HRGMv2_2087_17_51
Type: TC
Location: 54398 - 55069 (-)
Type: TC
Location: 54398 - 55069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.