dbCAN Logo

Cluster: HRGMv2_2087_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2087_15 HRGMv2_2087_15_8 7333 8679 - 2.A.66.1.33
TC HRGMv2_2087_15 HRGMv2_2087_15_9 8842 10329 + 8.A.59.2.1
TC HRGMv2_2087_15 HRGMv2_2087_15_10 10326 11342 + 3.A.1.2.14
TF HRGMv2_2087_15 HRGMv2_2087_15_11 11357 12967 + HTH_AraC | HTH_AraC
TF HRGMv2_2087_15 HRGMv2_2087_15_12 12964 13977 - GntR
TC HRGMv2_2087_15 HRGMv2_2087_15_13 14347 15351 + 3.A.1.2.1
TC HRGMv2_2087_15 HRGMv2_2087_15_14 15466 16965 + 3.A.1.2.23
TC HRGMv2_2087_15 HRGMv2_2087_15_15 16958 18049 + 3.A.1.2.14
TC HRGMv2_2087_15 HRGMv2_2087_15_16 18051 19073 + 3.A.1.2.14
TC HRGMv2_2087_15 HRGMv2_2087_15_17 19498 21183 + 2.A.114.1.3
TF HRGMv2_2087_15 HRGMv2_2087_15_18 21184 22026 - HTH_AraC | HTH_AraC
TC HRGMv2_2087_15 HRGMv2_2087_15_19 22196 23497 + 3.A.1.1.28
TC HRGMv2_2087_15 HRGMv2_2087_15_20 23494 24369 + 3.A.1.1.45
TC HRGMv2_2087_15 HRGMv2_2087_15_21 24366 25208 + 3.A.1.1.28
CAZyme HRGMv2_2087_15 HRGMv2_2087_15_22 25231 28038 + GH36
CAZyme HRGMv2_2087_15 HRGMv2_2087_15_23 28028 29503 + GH13_18
peptidase HRGMv2_2087_15 HRGMv2_2087_15_24 29577 30146 - M95.UPW
TC HRGMv2_2087_15 HRGMv2_2087_15_25 30376 32079 + 1.B.52.2.2
Gene ID: HRGMv2_2087_15_8
Type: TC
Location: 7333 - 8679 (-)
Gene ID: HRGMv2_2087_15_9
Type: TC
Location: 8842 - 10329 (+)
Gene ID: HRGMv2_2087_15_10
Type: TC
Location: 10326 - 11342 (+)
Gene ID: HRGMv2_2087_15_11
Type: TF
Location: 11357 - 12967 (+)
Gene ID: HRGMv2_2087_15_12
Type: TF
Location: 12964 - 13977 (-)
Gene ID: HRGMv2_2087_15_13
Type: TC
Location: 14347 - 15351 (+)
Gene ID: HRGMv2_2087_15_14
Type: TC
Location: 15466 - 16965 (+)
Gene ID: HRGMv2_2087_15_15
Type: TC
Location: 16958 - 18049 (+)
Gene ID: HRGMv2_2087_15_16
Type: TC
Location: 18051 - 19073 (+)
Gene ID: HRGMv2_2087_15_17
Type: TC
Location: 19498 - 21183 (+)
Gene ID: HRGMv2_2087_15_18
Type: TF
Location: 21184 - 22026 (-)
Gene ID: HRGMv2_2087_15_19
Type: TC
Location: 22196 - 23497 (+)
Gene ID: HRGMv2_2087_15_20
Type: TC
Location: 23494 - 24369 (+)
Gene ID: HRGMv2_2087_15_21
Type: TC
Location: 24366 - 25208 (+)
Gene ID: HRGMv2_2087_15_22
Type: CAZyme
Location: 25231 - 28038 (+)
Gene ID: HRGMv2_2087_15_23
Type: CAZyme
Location: 28028 - 29503 (+)
Gene ID: HRGMv2_2087_15_24
Type: peptidase
Location: 29577 - 30146 (-)
Gene ID: HRGMv2_2087_15_25
Type: TC
Location: 30376 - 32079 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2087_15_13 vegetarian > vegan 1.22185 0.02211
HRGMv2_2087_15_18 vegan > omnivore 1.48577 0.02699
HRGMv2_2087_15_19 vegan > omnivore 1.20190 0.03247

🧭 Explore Read Mapping of CGC

← Back to Cluster List