Cluster: HRGMv2_2087_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2087
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_1 | HRGMv2_2087_1_56 | 61818 | 62726 | + | 9.A.40.1.1 |
| peptidase | HRGMv2_2087_1 | HRGMv2_2087_1_57 | 62819 | 63547 | + | M20.UNW |
| CAZyme | HRGMv2_2087_1 | HRGMv2_2087_1_58 | 63607 | 65058 | + | GT5 |
| peptidase | HRGMv2_2087_1 | HRGMv2_2087_1_59 | 65139 | 65807 | + | S14.UPW |
| TC | HRGMv2_2087_1 | HRGMv2_2087_1_60 | 65890 | 68451 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2087_1_56
Type: TC
Location: 61818 - 62726 (+)
Type: TC
Location: 61818 - 62726 (+)
Gene ID: HRGMv2_2087_1_57
Type: peptidase
Location: 62819 - 63547 (+)
Type: peptidase
Location: 62819 - 63547 (+)
Gene ID: HRGMv2_2087_1_58
Type: CAZyme
Location: 63607 - 65058 (+)
Type: CAZyme
Location: 63607 - 65058 (+)
Gene ID: HRGMv2_2087_1_59
Type: peptidase
Location: 65139 - 65807 (+)
Type: peptidase
Location: 65139 - 65807 (+)
Gene ID: HRGMv2_2087_1_60
Type: TC
Location: 65890 - 68451 (+)
Type: TC
Location: 65890 - 68451 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.