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Cluster: HRGMv2_2087_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2087_4 HRGMv2_2087_4_21 17525 19534 + GH42
TF HRGMv2_2087_4 HRGMv2_2087_4_22 19844 20029 + PspC
CAZyme HRGMv2_2087_4 HRGMv2_2087_4_23 20070 21377 + GH13_20
STP HRGMv2_2087_4 HRGMv2_2087_4_24 21328 22464 + HhH-GPD
CAZyme HRGMv2_2087_4 HRGMv2_2087_4_25 22789 23802 + GT2
TC HRGMv2_2087_4 HRGMv2_2087_4_26 23890 25248 + 3.D.10.1.4
Gene ID: HRGMv2_2087_4_21
Type: CAZyme
Location: 17525 - 19534 (+)
Gene ID: HRGMv2_2087_4_22
Type: TF
Location: 19844 - 20029 (+)
Gene ID: HRGMv2_2087_4_23
Type: CAZyme
Location: 20070 - 21377 (+)
Gene ID: HRGMv2_2087_4_24
Type: STP
Location: 21328 - 22464 (+)
Gene ID: HRGMv2_2087_4_25
Type: CAZyme
Location: 22789 - 23802 (+)
Gene ID: HRGMv2_2087_4_26
Type: TC
Location: 23890 - 25248 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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