Cluster: HRGMv2_2075_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2075_2 | HRGMv2_2075_2_20 | 23032 | 24396 | + | 2.A.66.1.33 |
| CAZyme | HRGMv2_2075_2 | HRGMv2_2075_2_21 | 24317 | 26299 | - | GH2 |
| TC | HRGMv2_2075_2 | HRGMv2_2075_2_22 | 26444 | 28273 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | HRGMv2_2075_2 | HRGMv2_2075_2_23 | 28294 | 28407 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2075_2 | HRGMv2_2075_2_24 | 28686 | 30089 | + | EAL | GGDEF |
| TC | HRGMv2_2075_2 | HRGMv2_2075_2_25 | 30419 | 31534 | + | 9.A.47.2.1 |
Gene ID: HRGMv2_2075_2_20
Type: TC
Location: 23032 - 24396 (+)
Type: TC
Location: 23032 - 24396 (+)
Gene ID: HRGMv2_2075_2_21
Type: CAZyme
Location: 24317 - 26299 (-)
Type: CAZyme
Location: 24317 - 26299 (-)
Gene ID: HRGMv2_2075_2_22
Type: TC
Location: 26444 - 28273 (+)
Type: TC
Location: 26444 - 28273 (+)
Gene ID: HRGMv2_2075_2_23
Type:
Location: 28294 - 28407 (-)
Type:
Location: 28294 - 28407 (-)
Gene ID: HRGMv2_2075_2_24
Type: STP
Location: 28686 - 30089 (+)
Type: STP
Location: 28686 - 30089 (+)
Gene ID: HRGMv2_2075_2_25
Type: TC
Location: 30419 - 31534 (+)
Type: TC
Location: 30419 - 31534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.