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Cluster: HRGMv2_2075_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_28 HRGMv2_2075_28_24 28610 29551 - GT2
pfam HRGMv2_2075_28 HRGMv2_2075_28_25 29571 30158 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_8
STP HRGMv2_2075_28 HRGMv2_2075_28_26 30170 31273 - Aminotran_1_2
CAZyme HRGMv2_2075_28 HRGMv2_2075_28_27 31364 32089 - GT2
CAZyme HRGMv2_2075_28 HRGMv2_2075_28_28 32086 33045 - GT2
pfam HRGMv2_2075_28 HRGMv2_2075_28_29 33077 34207 - DAO | NAD_binding_8
pfam HRGMv2_2075_28 HRGMv2_2075_28_30 34195 35979 - DUF6020
CAZyme HRGMv2_2075_28 HRGMv2_2075_28_31 35981 36922 - GT2
TC HRGMv2_2075_28 HRGMv2_2075_28_32 37116 38813 + 9.B.142.3.8
Gene ID: HRGMv2_2075_28_24
Type: CAZyme
Location: 28610 - 29551 (-)
Gene ID: HRGMv2_2075_28_25
Type: pfam
Location: 29571 - 30158 (-)
Gene ID: HRGMv2_2075_28_26
Type: STP
Location: 30170 - 31273 (-)
Gene ID: HRGMv2_2075_28_27
Type: CAZyme
Location: 31364 - 32089 (-)
Gene ID: HRGMv2_2075_28_28
Type: CAZyme
Location: 32086 - 33045 (-)
Gene ID: HRGMv2_2075_28_29
Type: pfam
Location: 33077 - 34207 (-)
Gene ID: HRGMv2_2075_28_30
Type: pfam
Location: 34195 - 35979 (-)
Gene ID: HRGMv2_2075_28_31
Type: CAZyme
Location: 35981 - 36922 (-)
Gene ID: HRGMv2_2075_28_32
Type: TC
Location: 37116 - 38813 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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