Cluster: HRGMv2_2075_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2075_1 | HRGMv2_2075_1_255 | 269437 | 271104 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_2075_1 | HRGMv2_2075_1_256 | 271228 | 272193 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2075_1 | HRGMv2_2075_1_257 | 272430 | 273098 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2075_1 | HRGMv2_2075_1_258 | 273370 | 274719 | - | 1.A.26.1.2 |
| pfam | HRGMv2_2075_1 | HRGMv2_2075_1_259 | 274921 | 275571 | - | UPF0029 | DUF1949 |
| CAZyme | HRGMv2_2075_1 | HRGMv2_2075_1_260 | 275725 | 278394 | + | GT51 |
Gene ID: HRGMv2_2075_1_255
Type: TC
Location: 269437 - 271104 (-)
Type: TC
Location: 269437 - 271104 (-)
Gene ID: HRGMv2_2075_1_256
Type:
Location: 271228 - 272193 (-)
Type:
Location: 271228 - 272193 (-)
Gene ID: HRGMv2_2075_1_257
Type:
Location: 272430 - 273098 (-)
Type:
Location: 272430 - 273098 (-)
Gene ID: HRGMv2_2075_1_258
Type: TC
Location: 273370 - 274719 (-)
Type: TC
Location: 273370 - 274719 (-)
Gene ID: HRGMv2_2075_1_259
Type: pfam
Location: 274921 - 275571 (-)
Type: pfam
Location: 274921 - 275571 (-)
Gene ID: HRGMv2_2075_1_260
Type: CAZyme
Location: 275725 - 278394 (+)
Type: CAZyme
Location: 275725 - 278394 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.