Cluster: HRGMv2_2075_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2075_24 | HRGMv2_2075_24_21 | 23817 | 25514 | + | GH3 |
| TC | HRGMv2_2075_24 | HRGMv2_2075_24_22 | 25557 | 27068 | + | 3.A.1.2.20 |
| TC | HRGMv2_2075_24 | HRGMv2_2075_24_23 | 27079 | 28041 | + | 3.A.1.2.16 |
| NULL(UNKNOWN) | HRGMv2_2075_24 | HRGMv2_2075_24_24 | 28087 | 29304 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2075_24 | HRGMv2_2075_24_25 | 29398 | 30405 | + | BPD_transp_2 |
| CAZyme | HRGMv2_2075_24 | HRGMv2_2075_24_26 | 30475 | 31263 | + | CE1 |
Gene ID: HRGMv2_2075_24_21
Type: CAZyme
Location: 23817 - 25514 (+)
Type: CAZyme
Location: 23817 - 25514 (+)
Gene ID: HRGMv2_2075_24_22
Type: TC
Location: 25557 - 27068 (+)
Type: TC
Location: 25557 - 27068 (+)
Gene ID: HRGMv2_2075_24_23
Type: TC
Location: 27079 - 28041 (+)
Type: TC
Location: 27079 - 28041 (+)
Gene ID: HRGMv2_2075_24_24
Type:
Location: 28087 - 29304 (+)
Type:
Location: 28087 - 29304 (+)
Gene ID: HRGMv2_2075_24_25
Type: pfam
Location: 29398 - 30405 (+)
Type: pfam
Location: 29398 - 30405 (+)
Gene ID: HRGMv2_2075_24_26
Type: CAZyme
Location: 30475 - 31263 (+)
Type: CAZyme
Location: 30475 - 31263 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2075_24_26 | vegetarian > vegan | 3.03510 | 0.00229 |