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Cluster: HRGMv2_2075_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_1 HRGMv2_2075_1_174 171148 172269 - GH25
TC HRGMv2_2075_1 HRGMv2_2075_1_175 172331 173128 - 3.D.6.1.2
TC HRGMv2_2075_1 HRGMv2_2075_1_176 173147 173731 - 3.D.6.1.2
TC HRGMv2_2075_1 HRGMv2_2075_1_177 173732 174529 - 3.D.6.1.2
TC HRGMv2_2075_1 HRGMv2_2075_1_178 174522 175148 - 3.D.6.1.2
TC HRGMv2_2075_1 HRGMv2_2075_1_179 175138 176079 - 3.D.6.1.2
TC HRGMv2_2075_1 HRGMv2_2075_1_180 176092 177411 - 3.D.6.1.2
Gene ID: HRGMv2_2075_1_174
Type: CAZyme
Location: 171148 - 172269 (-)
Gene ID: HRGMv2_2075_1_175
Type: TC
Location: 172331 - 173128 (-)
Gene ID: HRGMv2_2075_1_176
Type: TC
Location: 173147 - 173731 (-)
Gene ID: HRGMv2_2075_1_177
Type: TC
Location: 173732 - 174529 (-)
Gene ID: HRGMv2_2075_1_178
Type: TC
Location: 174522 - 175148 (-)
Gene ID: HRGMv2_2075_1_179
Type: TC
Location: 175138 - 176079 (-)
Gene ID: HRGMv2_2075_1_180
Type: TC
Location: 176092 - 177411 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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