Cluster: HRGMv2_2075_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2075_11 | HRGMv2_2075_11_34 | 36545 | 39430 | + | 3.A.3.5.15 |
| TC | HRGMv2_2075_11 | HRGMv2_2075_11_35 | 39789 | 42389 | + | 3.A.9.1.2 |
| pfam | HRGMv2_2075_11 | HRGMv2_2075_11_36 | 42483 | 42656 | + | DUF4250 |
| pfam | HRGMv2_2075_11 | HRGMv2_2075_11_37 | 42649 | 43878 | + | RACo_C_ter | RACo_C_ter | Raco_middle |
| TC | HRGMv2_2075_11 | HRGMv2_2075_11_38 | 43981 | 46197 | + | 1.B.52.2.2 |
| CAZyme | HRGMv2_2075_11 | HRGMv2_2075_11_39 | 46359 | 47084 | + | CE4 |
Gene ID: HRGMv2_2075_11_34
Type: TC
Location: 36545 - 39430 (+)
Type: TC
Location: 36545 - 39430 (+)
Gene ID: HRGMv2_2075_11_35
Type: TC
Location: 39789 - 42389 (+)
Type: TC
Location: 39789 - 42389 (+)
Gene ID: HRGMv2_2075_11_36
Type: pfam
Location: 42483 - 42656 (+)
Type: pfam
Location: 42483 - 42656 (+)
Gene ID: HRGMv2_2075_11_37
Type: pfam
Location: 42649 - 43878 (+)
Type: pfam
Location: 42649 - 43878 (+)
Gene ID: HRGMv2_2075_11_38
Type: TC
Location: 43981 - 46197 (+)
Type: TC
Location: 43981 - 46197 (+)
Gene ID: HRGMv2_2075_11_39
Type: CAZyme
Location: 46359 - 47084 (+)
Type: CAZyme
Location: 46359 - 47084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2075_11_37 | vegetarian > vegan | 1.04079 | 0.00229 |