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Cluster: HRGMv2_2075_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_82 87250 89427 - GH73
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_83 89428 90450 - GT2
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_84 90556 91788 - GT4
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_85 91763 93199 - GT4
pfam HRGMv2_2075_9 HRGMv2_2075_9_86 93274 94407 - EpsG
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_87 94481 95299 - GT2
NULL(UNKNOWN) HRGMv2_2075_9 HRGMv2_2075_9_88 95296 96456 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2075_9 HRGMv2_2075_9_89 96476 97951 - 9.B.18.1.3
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_90 97996 98808 - GT2
Gene ID: HRGMv2_2075_9_82
Type: CAZyme
Location: 87250 - 89427 (-)
Gene ID: HRGMv2_2075_9_83
Type: CAZyme
Location: 89428 - 90450 (-)
Gene ID: HRGMv2_2075_9_84
Type: CAZyme
Location: 90556 - 91788 (-)
Gene ID: HRGMv2_2075_9_85
Type: CAZyme
Location: 91763 - 93199 (-)
Gene ID: HRGMv2_2075_9_86
Type: pfam
Location: 93274 - 94407 (-)
Gene ID: HRGMv2_2075_9_87
Type: CAZyme
Location: 94481 - 95299 (-)
Gene ID: HRGMv2_2075_9_88
Type:
Location: 95296 - 96456 (-)
Gene ID: HRGMv2_2075_9_89
Type: TC
Location: 96476 - 97951 (-)
Gene ID: HRGMv2_2075_9_90
Type: CAZyme
Location: 97996 - 98808 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2075_9_82 vegetarian > vegan 1.04922 0.00229

🧭 Explore Read Mapping of CGC

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